PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00429.1.g00260.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 289aa    MW: 32741.6 Da    PI: 5.7595
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00429.1.g00260.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.43.8e-20135199359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS.....STTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae.....dpkvveitYegeHnhe 59 
                                   Dg++WrKYGqK++++ ++prsYYrCt++   +C+++k v+++++      p + +++Y+g+H+++
  Zpz_sc00429.1.g00260.1.sm.mk 135 DGHQWRKYGQKKINNEKHPRSYYRCTYKqeqDCKATKTVQQQDKsvgadHPVMYTVVYHGQHTCK 199
                                   9**************************98999********98752222257899*********96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-23122199IPR003657WRKY domain
SuperFamilySSF1182908.63E-21129199IPR003657WRKY domain
SMARTSM007748.4E-29133200IPR003657WRKY domain
PfamPF031069.9E-24135199IPR003657WRKY domain
PROSITE profilePS5081114.711135175IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MCGLPTGQPP ACYDPSRIVC DHRSVMMEIA REQSLVTQLR AIVLPALQAD ERSELVVHMF  60
QNILDCSSKA MAELHLLQKS DDSPAEDTPL VDDKKRIRRI PDDFNKDEDV MLHHKNKRRR  120
FAVSQSIETP VPHYDGHQWR KYGQKKINNE KHPRSYYRCT YKQEQDCKAT KTVQQQDKSV  180
GADHPVMYTV VYHGQHTCKG TNNCSNSVTD DSETKTLGQS SSYSQSSIST KDCSEPCSDQ  240
QMSQDGNEPI NNSADLVAEN YMYEAFDMTA FAPLELESWD LAVLLGFGP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004977389.11e-112PREDICTED: probable WRKY transcription factor 63
TrEMBLK3Y9721e-112K3Y972_SETIT; Uncharacterized protein
STRINGSi010764m1e-111(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32583079
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.12e-18WRKY DNA-binding protein 46